{"id":19,"date":"2014-12-18T15:10:56","date_gmt":"2014-12-18T07:10:56","guid":{"rendered":"https:\/\/quantum.ch.ntu.edu.tw\/ycclab-new\/?page_id=19"},"modified":"2021-04-21T21:20:54","modified_gmt":"2021-04-21T13:20:54","slug":"publications","status":"publish","type":"page","link":"https:\/\/quantum.ch.ntu.edu.tw\/ycclab\/publications\/","title":{"rendered":"List of Publications"},"content":{"rendered":"

Journal Papers<\/h4>\n
    \n
  1. M.T. Wong, and Y.-C. Cheng, “A quantum Langevin equation approach for two-dimensional electronic spectraof coupled vibrational and electronic dynamics” J. Chem. Phys<\/em>. 154, 154107 (2021)[link<\/a>][pdf<\/a>]<\/li>\n
  2. S.-H. Yeh, A. Manjanath, Y.-C. Cheng, J.-D. Chai, and C.-P. Hsu, “Excitation energies from thermally assisted-occupation density functional theory : Theory and computational implementation” J. Chem. Phys. 153, 084120 (2020). [link<\/a>][pdf<\/a>]<\/li>\n
  3. S.-C. Wang, K.-Y. Cheng, J.-H. Fu, Y.-C. Cheng, and Y.-T. Chan, “Conformational Regulation of Multivalent Terpyridine Ligands for Self-Assembly of Heteroleptic Metallo-Supramolecules” J. Am. Chem. Soc. 2020, 142, 39, 16661\u201316667. [link<\/a>][pdf<\/a>]<\/li>\n
  4. Y.-J. Zhong, C.-F. Lan, B.-C. Lin, C.-D. Hu, Y.-C. Cheng, C.-P. Hsu, “The anisotropy and temperature dependence in the mobility of rubrene” Adv. Quantum. Chem.\u00a0<\/em>2020<\/strong>, 81, 219-241. [link<\/a>]<\/li>\n
  5. W.-C. Chen and Y.-C. Cheng, \u201cElucidating the Magnitude of Internal Reorganization Energy of Molecular Excited States from the Perspective of Transition Density\u201d J. Phys. Chem. A <\/em>(2020) [link<\/a>][pdf<\/a>]<\/li>\n
  6. T.H. Mansoure, H. Ayalew, W.-L. Kao, J.-J Shyue, S.-C. Luo, Y.-C. Cheng, H.-H Yu, \u201cPerfluoro-Functionalized Conducting Polymers Enhance Electrocatalytic Oxygen Reduction\u201c CS Appl. Energy Mater.<\/i><\/span>\u00a02020<\/span><\/strong>, 3<\/em><\/span>, 1<\/em><\/span>, 1171-1180 [link<\/a>][pdf<\/a>]<\/span><\/li>\n
  7. H.-H. Teh, B.-Y. Jin, and Y.-C. Cheng, \u201cFrozen-mode small polaron quantum master equation with
    \nvariational bound for excitation energy transfer in molecular aggregates\u201d J. Chem. Phys<\/em>., 150<\/strong>, 224110 (2019) [    link<\/a>] [pdf<\/a>]<\/li>\n
  8. Y.-C. Huang and Y.-C. Cheng, \u201cC-N Bond Rotation Controls Photoinduced Electron Transfer in an
    \nAminostyrene-Stilbene Donor-Acceptor System\u201d J. Phys. Chem. A<\/em>, 123<\/strong>, 4333 (2019) [    link<\/a>][pdf<\/a>]<\/li>\n
  9. W.-C. Chen, P.-T. Chou, and Y.-C. Cheng, \u201cLow Internal Reorganization Energy of the Metal-Metalto-Ligand Charge Transfer Emission in Dimeric Pt(II) Complexes\u201d J. Phys. Chem. C<\/em>, 123<\/strong>, 10225
    \n(2019).[    link<\/a>][pdf<\/a>]<\/li>\n
  10. Shou-Ting Hsieh, Lu Zhang, De-Wei Ye, Xuhui Huang and Yuan-Chung Cheng, \u201cA theoretical study on the dynamics of light harvesting in the dimeric photosystem II core complex: regulation and robustness of energy transfer pathways\u201d Faraday Discuss.<\/span><\/em>\u00a0(2019). [link<\/a>][pdf]<\/a><\/li>\n
  11. P.-J. Wu, Y.-F. Wang, W.-C. Chen, C.-W. Wang, Joy Cheng, Vencent Chang, C.-Y. Chang, John Lin, Y.-C. Cheng, \u201cNanoscale inhomogeneity and photoacid generation dynamics in extreme ultraviolet resist materials.\u201d, Proc. SPIE 10586, Advances in Patterning Materials and Processes XXXV<\/em>, [link<\/a>][pdf<\/a>]
    \n105861O (March 2018); doi: 10.1117\/12.2316308. (SPIE Advanced Lithography 2018 Jeffrey Byers Memorial Award)<\/li>\n
  12. B.-X. Wang, M.-J. Tao, Q. Ai, T. Xin, N. Lambert, D. Ruan, Y.-C. Cheng, F. Nori, F.-G. Deng, and G.-L. Long, \u201cEfficient quantum simulation of photosynthetic light harvesting\u201d Npj Quantum Information<\/em> 4<\/strong>, 52 (2018).[link<\/a>][pdf<\/a>]<\/li>\n
  13. Mani Ramanathan, Yu-Hao Wang, Yi-Hung Liu, Shie-Ming Peng, Yuan-Chung Cheng, and Shiuh-Tzung Liu, \u201cPreparation of Ketimines from Aryldiazonium Salts, Arenes, and Nitriles via Intermolecular Arylation of N-Arylnitrilium Ions\u201d J. Org. Chem.<\/span><\/em>, 83 <\/strong>, 6133 (2018). [link<\/a>][PDF<\/a>]<\/li>\n
  14. Yu-Fu Wang and Yuan-Chung Cheng, \u201cMolecular electrostatic potential on the proton-donating atom as a theoretical descriptor of excited state acidity\u201d Phys. Chem. Chem. Phys.<\/span><\/em>, 20<\/strong>, 4351 (2018). [link<\/a>][pdf<\/a>]<\/li>\n
  15. Kuo-Hsuan Yu, Shou-Ling Huang, Yi-Hung Liu, Yu Wang, Shiuh-Tzung Liu, Yuan-Chung Cheng, Ya-Fan Lin and Jwu-Ting Chen, \u201cKinetics, Mechanism and Theoretical Studies of Norbornene-Ethylene Alternating Copolymerization Catalyzed by Organopalladium(II) Complexes Bearing Hemilabile \u03b1-Amino\u2013pyridine\u201d Molecules<\/span><\/em>, 22<\/strong>, 1095 (2017). [link<\/a>][pdf<\/a>]<\/li>\n
  16. Jin Feng, Chi-Wei Tseng, Tingwei Chen, Xia Leng, Huabing Yin, Yuan-Chung Cheng, Michael Rohlfing, and Yuchen Macorresponding, \u201cA new energy transfer channel from carotenoids to chlorophylls in purple bacteria\u201d Nat. Commun. <\/span><\/em>, 8<\/strong>, 71 (2017). [link<\/a>][pdf<\/a>]<\/li>\n
  17. Meng-Shiue Tsai, Chun-Lin Ou, Chi-Jui Tsai, Yen-Chin Huang, Yuan-Chung Cheng, Shih-Sheng Sun, and Jye-Shane Yang, \u201c Fluorescence Enhancement of Unconstrained GFP Chromophore Analogues Based on the Push\u2013Pull Substituent Effect\u201d J. Org. Chem.<\/span><\/em>, 82 <\/strong>, 8031 (2017). [link<\/a>][pdf<\/a>]<\/li>\n
  18. Hung-Hsuan Teh and Yuan-Chung Cheng, \u201cOn the accuracy of the LSC-IVR approach for excitation energy transfer in molecular aggregates\u201d J. Chem. Phys.<\/span><\/em>, 146<\/strong>, 144105 (2017). [link<\/a>][pdf<\/a>]<\/li>\n
  19. Ming-Jie Tao, Qing Ai, Fu-Guo Deng and Yuan-Chung Cheng, \u201cProposal for probing energy transfer pathway by single-molecule pump-dump experiment\u201d Sci. Rep.<\/span><\/em>, 6<\/strong>, 27535 (2016). [link<\/a>][pdf<\/a>]<\/li>\n
  20. Hong-Bin Chen, Neill Lambert, Yuan-Chung Cheng, Yueh-Nan Chen and Franco Nori, \u201cUsing non-Markovian measures to evaluate quantum master equations for photosynthesis\u201d Sci. Rep.<\/span><\/em>, 5<\/strong>, 12753 (2015). [link<\/a>][pdf<\/a>]<\/li>\n
  21. C.-W. Tung, Y.-Y. Hsu, Y.-P. Shen, Y. Zheng, T.-S. Chan, H.-S. Sheu, Y.-C. Cheng, H.-M. Chen,
    \n\u201cReversible adapting layer produces robust single-crystal electrocatalyst for oxygen evolution\u201d Nat. Comm.<\/em>, 6,<\/strong> 8106 (2015). [    link<\/a>][pdf<\/a>]<\/li>\n
  22. Y. Chang and Y.C. Cheng, \u201cOn the Accuracy of Coherent Modified Redfield Theory in Simulating Excitation Energy Transfer Dynamics\u201d J. Chem. Phys.<\/span><\/em>, 142<\/strong>, 034109 (2015). [link<\/a>, pdf<\/a>]<\/li>\n
  23. Y.-H. Hwang-Fu, W. Chen, Y.C. Cheng, \u201cA Coherent Modified\u00a0Redfield Theory for Excitation Energy Transfer in Molecular\u00a0Aggregates\u201d Chem. Phys.<\/span><\/em>, 447<\/span><\/strong>, 46 (2015). [link<\/a>, pdf<\/a>]<\/li>\n
  24. S.-C. Luo, Y. Khin, S.-J. Huang, Y. Yang, T.-Y. Hou, Y.C.\u00a0Cheng, H. M. Chen, Y.-Y. Chin, C.-T. Chen, H.-J. Lin, J. K.-H.\u00a0Tang, J. C. C. Chan, \u201cProbing the spatial organization of\u00a0Bacteriochlorophyll c by solid-state nuclear magnetic resonance\u201d\u00a0Biochemistry<\/span><\/em>, 53<\/span><\/strong>, 5515 (2014). [link<\/a>][pdf<\/a>]<\/li>\n
  25. Y.-H. Ho, M.-C. Chang, K.-H. Yu, Y.-H. Liu, Y. Wang, Y.C.\u00a0Cheng, J.-T. Chen, \u201cCO2<\/sub>\u00a0fixation by dicopper(II) complexes\u00a0in hypodentate framework of N8<\/sub>O2<\/sub>\u201d, Dalton Trans.<\/span><\/em>, 43<\/span><\/strong>,\u00a06287 (2014). [link<\/a>][pdf<\/a>]<\/li>\n
  26. Q. Ai, Y.-J. Fan, B.-Y. Jin, Y.C. Cheng, \u201cAn efficient quantum\u00a0jump method for coherent energy transfer dynamics in\u00a0photosynthetic systems under the influence of laser fields\u201d, New\u00a0J. Phys.<\/span><\/em>, 16<\/span><\/strong>, 053033 (2014). [link<\/a>, pdf<\/a>]<\/li>\n
  27. H.-T. Chang, P.-P. Zhang, Y.C. Cheng, \u201cCriteria for the\u00a0accuracy of small polaron quantum master equation in simulating\u00a0excitation energy transfer dynamics\u201d, J. Chem. Phys.<\/span><\/em>, 139<\/span><\/strong>,\u00a0224112 (2013). [link<\/a>, pdf<\/a>]<\/li>\n
  28. Q. Ai, T.-C. Yen, B.-Y. Jin, Y.C. Cheng, \u201cClustered geometries\u00a0exploiting quantum coherence effects for efficient energy\u00a0transfer in light harvesting\u201d, J. Phys. Chem. Lett.<\/span><\/em>, 4<\/span><\/strong>, 2577\u00a0(2013). [link<\/a>, pdf<\/a>]<\/li>\n
  29. C.-K. Lin, Y.-F. Wang, Y.C. Cheng, J.-S. Yang, \u201cMultisite\u00a0constrained model of trans-4-(N,N-Dimethylamino)-4\u2032-nitrostilbene for structural elucidation\u00a0of radiative and nonradiative excited states\u201d, J. Phys. Chem.\u00a0A<\/span><\/em>, 117<\/span><\/strong>, 3158 (2013). [link<\/a>, pdf<\/a>]<\/li>\n
  30. S.J. Jang, Y.C. Cheng, \u201cResonance energy flow dynamics of\u00a0coherently delocalized excitons in biological and\u00a0macromolecular systems: Recent theoretical advances and open\u00a0issues\u201d, WIREs Computat. Mol. Sci.<\/em><\/span>, 3<\/span><\/strong>, 84 (2013). [link<\/a>, pdf<\/a>]<\/li>\n
  31. N. Lambert, Y.-N. Chen, Y.C. Cheng, C.-M. Li, G.-Y. Chen, F.\u00a0Nori, \u201cQuantum biology\u201d, Nat. Phys.<\/span><\/em>, 9<\/span><\/strong>, 10 (2013). [link<\/a>, pdf<\/a>]<\/li>\n
  32. H.-T. Chang, Y.C. Cheng, \u201cCoherent versus Incoherent\u00a0Excitation Energy Transfer in Molecular Systems\u201d, J. Chem.\u00a0Phys.<\/span><\/em>, 137<\/span><\/strong>, 165103 (2012). [link<\/a>, pdf<\/a>]<\/li>\n
  33. N. Lambert, Y.-N. Chen, Y.C. Cheng, C.-M. Li, G.-Y. Chen, F. Nori, \u201cFunctional quantum biology in photosynthesis and magnetoreception\u201d, arXiv:1205.0883v1 (2012). This work was reported in News of Technology Review published by MIT: \u201cThe<\/a>
    \n     Quantum Biology Conundrum<\/a>\u201d<\/li>\n
  34. N.S. Ginsberg, J.A. Davis, M. Ballottari, Y.C. Cheng, R.\u00a0Bassi, G.R. Fleming, \u201cSolving structure in the CP29 light\u00a0harvesting complex with polarization-phased 2D electronic\u00a0spectroscopy\u201d, Proc. Nat. Acad. Sci. U.S.A.<\/span><\/em>, 108<\/span><\/strong>, 3848 (2011). [link<\/a>, pdf<\/a>]<\/li>\n
  35. M. Sarovar, Y.C. Cheng, K.B. Whaley, \u201cEnvironmental\u00a0correlation effects on excitation energy transfer in\u00a0photosynthetic light harvesting\u201d, Phys. Rev. E<\/em>, 83<\/span><\/strong>, 011906\u00a0(2011). [link<\/a>, pdf<\/a>]<\/li>\n
  36. T. Calhoun, N. Ginsberg, G. Schlau-Cohen, Y.C. Cheng, M.\u00a0Ballottari, R. Bassi, G.R. Fleming, \u201cQuantum Coherence Enabled\u00a0Determination of the Energy Landscape in Light Harvesting\u00a0Complex II.\u201d, J. Phys. Chem. B<\/span><\/em>, 113<\/span><\/strong>, 16291 (2009). [link<\/a>, pdf<\/a>]<\/li>\n
  37. N.S. Ginsberg, Y.C. Cheng, and G.R. Fleming, \u201cTwo-Dimensional Electronic Spectroscopy of Molecular Aggregates.\u201d, Accounts of Chemical Research<\/span><\/em>, 42<\/span><\/strong>, 1352 (2009) [link<\/a>, pdf<\/a>]<\/li>\n
  38. Y.C. Cheng and G.R. Fleming, \u201cDynamics of light harvesting in photosynthesis.\u201d, Annual Review of Physical Chemistry<\/span><\/em>, 60<\/span><\/strong>, 242 (2009). [link<\/a>, pdf<\/a>]<\/li>\n
  39. H. Lee, Y.C. Cheng, and G.R. Fleming, \u201cQuantum coherence accelerating photosynthetic energy transfer.\u201d, In Ultrafast Phenomena XVI, edited by P. Corkum, K. Nelson, E. Riedle, R. Schoenline, S. De Silvestri, (Springer, Berlin 2008), [link<\/a>]<\/li>\n
  40. S. Jang, Y.C. Cheng, D.R. Reichman, and J.D. Eaves, \u201cTheory of coherent resonance energy transfer.\u201d, Journal of Chemical Physics<\/span><\/em>, 129<\/span><\/strong>, 101104 (2008). [link<\/a>, pdf<\/a>]<\/li>\n
  41. Y.C. Cheng, T.K. Ahn, T.J. Avenson, D. Zigmantas, K.K. Niyogi, M. Ballottari, R. Bassi, and G.R. Fleming, \u201cKinetic modeling of charge-transfer quenching in the CP29 minor complex.\u201d, Journal of Physical Chemistry B<\/span><\/em>, 112<\/span><\/strong>, 13418 (2008). [link<\/a>, pdf<\/a>]<\/li>\n
  42. Y.C. Cheng and R.J. Silbey, \u201cA unified theory for charge-carrier transport in organic crystals.\u201d, Journal of Chemical Physics<\/span><\/em>, 128<\/span><\/strong>, 114713 (2008). [link<\/a>, pdf<\/a>]<\/li>\n
  43. T. Ahn, T.J. Avenson, M. Ballottari, Y.C. Cheng, K.K. Niyogi, R. Bassi, G.R. Fleming, \u201cArchitecture of a charge-transfer state regulating light harvesting in a plant antenna protein.\u201d, Science<\/span><\/em>, 320<\/span><\/strong>, 794 (2008). [link<\/a>, pdf<\/a>]<\/li>\n
  44. Y.C. Cheng and G.R. Fleming, \u201cCoherence quantum beats in two-dimensional electronic spectroscopy.\u201d, Journal of Physical Chemistry A<\/span><\/em>, 112<\/span><\/strong>, 4254 (2008). [link<\/a>, pdf<\/a>]<\/li>\n
  45. Y.C. Cheng, G.S. Engel, and G.R. Fleming, \u201cElucidation of population and coherence dynamics using cross-peaks in two-dimensional electronic spectroscopy\u201d, Chemical Physics<\/span><\/em>, 341<\/span><\/strong>, 285 (2007). [link<\/a>, pdf<\/a>]<\/li>\n
  46. Y.C. Cheng, H. Lee, and G.R. Fleming, \u201cEfficient simulation of three-pulse photon-echo signals with application to the determination of electronic coupling in a bacterial photosynthetic reaction center.\u201d, Journal of Physical Chemistry A<\/span><\/em>, 111<\/span><\/strong>, 9499 (2007). [link<\/a>, pdf<\/a>]<\/li>\n
  47. H. Lee, Y.C. Cheng, and G.R. Fleming, \u201cCoherence dynamics in photosynthesis: protein protection of excitonic coherence.\u201d, Science<\/span><\/em>, 316<\/span><\/strong>, 1462 (2007). [link<\/a>, pdf<\/a>]<\/li>\n
  48. G.S. Engel, T.R. Calhoun, E.L. Read, T.K. Ahn, T. Mancal, Y.C. Cheng, R.E. Blankenship, and G.R. Fleming, \u201cEvidence for wavelike energy transfer through quantum coherence in photosynthetic systems.\u201d, Nature<\/span><\/em>, 446<\/span><\/strong>, 782 (2007). [link<\/a>, pdf<\/a>]<\/li>\n
  49. Y.C. Cheng and R.J. Silbey, \u201cCoherence in the B800 ring of purple bacteria LH2.\u201d, Physical Review Letters<\/span><\/em>, 96<\/span><\/strong>, 028103 (2006). [link<\/a>, pdf<\/a>]<\/li>\n
  50. Y.C. Cheng and R.J. Silbey, \u201cMarkovian approximation in the relaxation of quantum open systems.\u201d, Journal of Physical Chemistry B<\/span><\/em>, 109<\/span><\/strong>, 21399 (2005). [link<\/a>, pdf<\/a>]<\/li>\n
  51. Y.C. Cheng and R.J. Silbey, \u201cA microscopic quantum dynamics study on the noise threshold of fault-tolerant quantum error correction.\u201d, Physical Review A<\/span><\/em>, 72<\/span><\/strong>, 012320 (2005). [link<\/a>, pdf<\/a>]<\/li>\n
  52. Y.C. Cheng and R.J. Silbey, \u201cStochastic Liouville equation approach for the effect of noise in quantum computations.\u201d, Physical Review A<\/span><\/em>, 69<\/span><\/strong>, 052325 (2004). [link<\/a>, pdf<\/a>]<\/li>\n
  53. E. Barkai and Y.C. Cheng, \u201cAging continuous time random walks.\u201d, Journal of Chemical Physics<\/span><\/em>, 118<\/span><\/strong>, 6167 (2003). [link<\/a>, pdf<\/a>]<\/li>\n
  54. Y.C. Cheng, R.J. Silbey, D.A. da Silva, J.P. Calbert, J. Cornil, and J.L. Bredas, \u201cThree-dimensional band structure and bandlike mobility in oligoacene single crystals: a theoretical investigation.\u201d, Journal of Chemical Physics<\/span><\/em>, 118<\/span><\/strong>, 3764 (2003). [link<\/a>, pdf<\/a>]<\/li>\n
  55. Y.C. Cheng, Y.K. Chen, T.M. Huang, C.I. Yu, G.H. Lee, Y. Wang, J.T. Chen, \u201cSynthesis of metallacyclobutenes of late transition metals via nucleophilic addition of allenyl or propargyl complexes.\u201d, Organometallics<\/span><\/em>, 17<\/span><\/strong>, 2953 (1998). [link<\/a>, pdf<\/a>]<\/li>\n<\/ol>\n

    <\/p>\n

    Conference Proceedings<\/h4>\n